Why aside from the display but not aside of the keyboard? Either a Mac is usable out of the box or it isn't. Do you think it is likelier that people already have a monitor but not a keyboard and mouse?
Well, you're correct in that Apple has had a spotty history with this. The Macintosh II series (the first headless line of Macs) came with a mouse, but not keyboard or display. I don't think the PowerMacs came with anything. But if memory serves, the Mac Pro (1st gen) line came with both keyboard and mouse.
I think the caveat I (and Apple) made for displays is mainly an economic one. It's fairly cheap to include a keyboard and mouse, but including a display some may not want would have a lot of blowback from customers. The NeXT machines were different in that they were mainly used for scientific and software engineering purposes -- true workstations -- and so it was seen as a complete system, display* and all. The Mac Pro is used for a much wider range of activities, so many more customers want/require different displays.
And yes, I do think the Mac mini should come with a keyboard and mouse. Many people buy the mini as their first Mac, and it's important to have them experience a keyboard with Mac-specific keys and functionality on it.
(*) The NeXT MegaPixel Display monitors were also running at 92dpi, so they were effectively custom hardware to support NeXTSTEP's Display PostScript rendering engine. Although Apple has used the Retina display for a similar purpose in its iOS and MBP models, for some reason they have not released a "Quad" display to support 4k on the nMP. This does not make sense to me.
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